Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cux2P70298 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cux2P70298 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cux2P70298 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cux2P70298 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cux2P70298 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC21.07■□□□□ 0.96
Cux2P70298 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC21.07■□□□□ 0.96
Cux2P70298 Gm23085-201ENSMUST00000157849 293 ntBASIC21.07■□□□□ 0.96
Cux2P70298 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cux2P70298 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC21.07■□□□□ 0.96
Cux2P70298 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cux2P70298 Gm45504-201ENSMUST00000211407 2107 ntBASIC21.07■□□□□ 0.96
Cux2P70298 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC21.07■□□□□ 0.96
Cux2P70298 AC154290.1-201ENSMUST00000223786 1240 ntBASIC21.07■□□□□ 0.96
Cux2P70298 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cux2P70298 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cux2P70298 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cux2P70298 Gm44291-201ENSMUST00000203102 2865 ntBASIC21.07■□□□□ 0.96
Cux2P70298 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cux2P70298 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cux2P70298 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cux2P70298 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC21.06■□□□□ 0.96
Cux2P70298 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Gm5852-201ENSMUST00000194119 1021 ntBASIC21.06■□□□□ 0.96
Cux2P70298 Gm5542-201ENSMUST00000195485 1089 ntBASIC21.06■□□□□ 0.96
Cux2P70298 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC21.06■□□□□ 0.96
Cux2P70298 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cux2P70298 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cux2P70298 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cux2P70298 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cux2P70298 Gm14314-201ENSMUST00000118225 1015 ntBASIC21.05■□□□□ 0.96
Cux2P70298 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cux2P70298 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Cux2P70298 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC21.05■□□□□ 0.96
Cux2P70298 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC21.05■□□□□ 0.96
Cux2P70298 Gm6905-201ENSMUST00000205729 511 ntBASIC21.05■□□□□ 0.96
Cux2P70298 Gm2517-201ENSMUST00000215651 348 ntBASIC21.05■□□□□ 0.96
Cux2P70298 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cux2P70298 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cux2P70298 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cux2P70298 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cux2P70298 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cux2P70298 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cux2P70298 Gm37133-201ENSMUST00000192705 1922 ntBASIC21.05■□□□□ 0.96
Cux2P70298 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cux2P70298 Gm4782-201ENSMUST00000168705 2046 ntBASIC21.05■□□□□ 0.96
Cux2P70298 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cux2P70298 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cux2P70298 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cux2P70298 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
Cux2P70298 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC21.04■□□□□ 0.96
Cux2P70298 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC21.04■□□□□ 0.96
Cux2P70298 Gm17831-201ENSMUST00000205579 900 ntBASIC21.04■□□□□ 0.96
Cux2P70298 Gm45909-201ENSMUST00000212413 1031 ntBASIC21.04■□□□□ 0.96
Cux2P70298 Prrxl1-205ENSMUST00000228878 723 ntBASIC21.04■□□□□ 0.96
Cux2P70298 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Gm37297-201ENSMUST00000192974 2384 ntBASIC21.04■□□□□ 0.96
Cux2P70298 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cux2P70298 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Gm3765-201ENSMUST00000130985 1447 ntBASIC21.04■□□□□ 0.96
Cux2P70298 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Cux2P70298 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cux2P70298 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cux2P70298 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cux2P70298 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cux2P70298 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cux2P70298 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cux2P70298 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms