Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Six5P70178 Gm14350-201ENSMUST00000116642 640 ntBASIC12.32□□□□□ -0.44
Six5P70178 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.32□□□□□ -0.44
Six5P70178 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.32□□□□□ -0.44
Six5P70178 Gm44069-201ENSMUST00000204898 506 ntBASIC12.32□□□□□ -0.44
Six5P70178 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.32□□□□□ -0.44
Six5P70178 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Six5P70178 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.31□□□□□ -0.44
Six5P70178 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.31□□□□□ -0.44
Six5P70178 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.31□□□□□ -0.44
Six5P70178 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Six5P70178 Gm16202-201ENSMUST00000117532 544 ntBASIC12.31□□□□□ -0.44
Six5P70178 Gm8213-201ENSMUST00000118191 441 ntBASIC12.31□□□□□ -0.44
Six5P70178 Gm11978-201ENSMUST00000122315 466 ntBASIC12.31□□□□□ -0.44
Six5P70178 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Six5P70178 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Six5P70178 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.31□□□□□ -0.44
Six5P70178 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Six5P70178 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Gm38671-201ENSMUST00000200573 130 ntBASIC12.31□□□□□ -0.44
Six5P70178 Gm5356-201ENSMUST00000093326 615 ntBASIC12.31□□□□□ -0.44
Six5P70178 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Six5P70178 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Six5P70178 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Six5P70178 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Six5P70178 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Six5P70178 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.31□□□□□ -0.44
Six5P70178 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Six5P70178 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six5P70178 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.3□□□□□ -0.44
Six5P70178 Grk6-205ENSMUST00000224653 2976 ntBASIC12.3□□□□□ -0.44
Six5P70178 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.3□□□□□ -0.44
Six5P70178 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.3□□□□□ -0.44
Six5P70178 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Six5P70178 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Six5P70178 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Six5P70178 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.3□□□□□ -0.44
Six5P70178 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.3□□□□□ -0.44
Six5P70178 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.3□□□□□ -0.44
Six5P70178 Gm27892-201ENSMUST00000185017 106 ntBASIC12.3□□□□□ -0.44
Six5P70178 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.3□□□□□ -0.44
Six5P70178 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.3□□□□□ -0.44
Six5P70178 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.3□□□□□ -0.44
Six5P70178 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six5P70178 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Six5P70178 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Six5P70178 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.3□□□□□ -0.44
Six5P70178 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms