Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.51□□□□□ -0.09
Hmgb1P63158 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Hmgb1P63158 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb1P63158 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.5□□□□□ -0.09
Hmgb1P63158 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Hmgb1P63158 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Hmgb1P63158 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.5□□□□□ -0.09
Hmgb1P63158 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.5□□□□□ -0.09
Hmgb1P63158 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Hmgb1P63158 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Hmgb1P63158 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Gm38223-201ENSMUST00000194484 695 ntBASIC14.5□□□□□ -0.09
Hmgb1P63158 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.5□□□□□ -0.09
Hmgb1P63158 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Hmgb1P63158 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Hmgb1P63158 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Hmgb1P63158 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Hmgb1P63158 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Hmgb1P63158 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmgb1P63158 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Hmgb1P63158 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.49□□□□□ -0.09
Hmgb1P63158 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Gm43636-201ENSMUST00000201501 2235 ntBASIC14.49□□□□□ -0.09
Hmgb1P63158 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.49□□□□□ -0.09
Hmgb1P63158 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.49□□□□□ -0.09
Hmgb1P63158 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.49□□□□□ -0.09
Hmgb1P63158 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.49□□□□□ -0.09
Hmgb1P63158 Gm19220-201ENSMUST00000222682 803 ntBASIC14.49□□□□□ -0.09
Hmgb1P63158 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.49□□□□□ -0.09
Hmgb1P63158 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.49□□□□□ -0.09
Hmgb1P63158 Gm26315-201ENSMUST00000083890 321 ntBASIC14.49□□□□□ -0.09
Hmgb1P63158 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Hmgb1P63158 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmgb1P63158 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Hmgb1P63158 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Hmgb1P63158 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Gm15371-201ENSMUST00000117057 784 ntBASIC14.48□□□□□ -0.09
Hmgb1P63158 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.48□□□□□ -0.09
Hmgb1P63158 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.48□□□□□ -0.09
Hmgb1P63158 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.48□□□□□ -0.09
Hmgb1P63158 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.48□□□□□ -0.09
Hmgb1P63158 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.48□□□□□ -0.09
Hmgb1P63158 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.48□□□□□ -0.09
Hmgb1P63158 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.48□□□□□ -0.09
Hmgb1P63158 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.48□□□□□ -0.09
Hmgb1P63158 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.48□□□□□ -0.09
Hmgb1P63158 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb1P63158 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms