Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crnkl1P63154 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.02□□□□□ -0.33
Crnkl1P63154 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crnkl1P63154 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Crnkl1P63154 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.02□□□□□ -0.33
Crnkl1P63154 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Crnkl1P63154 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.01□□□□□ -0.33
Crnkl1P63154 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Gm13015-201ENSMUST00000118674 204 ntBASIC13.01□□□□□ -0.33
Crnkl1P63154 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Crnkl1P63154 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.01□□□□□ -0.33
Crnkl1P63154 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.01□□□□□ -0.33
Crnkl1P63154 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.01□□□□□ -0.33
Crnkl1P63154 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Crnkl1P63154 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Crnkl1P63154 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13□□□□□ -0.33
Crnkl1P63154 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13□□□□□ -0.33
Crnkl1P63154 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Crnkl1P63154 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Gm7336-201ENSMUST00000107041 1232 ntBASIC13□□□□□ -0.33
Crnkl1P63154 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Crnkl1P63154 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Crnkl1P63154 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13□□□□□ -0.33
Crnkl1P63154 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Crnkl1P63154 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13□□□□□ -0.33
Crnkl1P63154 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Crnkl1P63154 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Crnkl1P63154 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Crnkl1P63154 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Crnkl1P63154 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Crnkl1P63154 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Crnkl1P63154 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Crnkl1P63154 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Crnkl1P63154 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Crnkl1P63154 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.99□□□□□ -0.33
Crnkl1P63154 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Crnkl1P63154 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Crnkl1P63154 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Crnkl1P63154 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.99□□□□□ -0.33
Crnkl1P63154 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Crnkl1P63154 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Crnkl1P63154 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Crnkl1P63154 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Crnkl1P63154 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms