Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sf3b6P59708 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.69□□□□□ -0.54
Sf3b6P59708 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sf3b6P59708 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sf3b6P59708 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm12403-201ENSMUST00000121384 959 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Mir1897-201ENSMUST00000122581 272 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.68□□□□□ -0.54
Sf3b6P59708 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm17837-201ENSMUST00000186435 985 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm17330-201ENSMUST00000221047 165 ntBASIC11.68□□□□□ -0.54
Sf3b6P59708 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sf3b6P59708 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sf3b6P59708 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.67□□□□□ -0.54
Sf3b6P59708 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sf3b6P59708 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.67□□□□□ -0.54
Sf3b6P59708 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.67□□□□□ -0.54
Sf3b6P59708 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sf3b6P59708 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.67□□□□□ -0.54
Sf3b6P59708 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.67□□□□□ -0.54
Sf3b6P59708 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.67□□□□□ -0.54
Sf3b6P59708 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sf3b6P59708 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.67□□□□□ -0.54
Sf3b6P59708 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.67□□□□□ -0.54
Sf3b6P59708 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.67□□□□□ -0.54
Sf3b6P59708 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.67□□□□□ -0.54
Sf3b6P59708 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.67□□□□□ -0.54
Sf3b6P59708 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.67□□□□□ -0.54
Sf3b6P59708 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.67□□□□□ -0.54
Sf3b6P59708 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.67□□□□□ -0.54
Sf3b6P59708 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.67□□□□□ -0.54
Sf3b6P59708 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sf3b6P59708 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms