Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rrp1P56183 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rrp1P56183 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rrp1P56183 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Rrp1P56183 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rrp1P56183 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rrp1P56183 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rrp1P56183 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rrp1P56183 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.83□□□□□ -0.04
Rrp1P56183 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.83□□□□□ -0.04
Rrp1P56183 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.83□□□□□ -0.04
Rrp1P56183 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.83□□□□□ -0.04
Rrp1P56183 Gm21854-201ENSMUST00000179901 471 ntBASIC14.83□□□□□ -0.04
Rrp1P56183 Gm19078-201ENSMUST00000206311 727 ntBASIC14.83□□□□□ -0.04
Rrp1P56183 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.83□□□□□ -0.04
Rrp1P56183 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rrp1P56183 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rrp1P56183 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rrp1P56183 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Gm12151-201ENSMUST00000121374 290 ntBASIC14.82□□□□□ -0.04
Rrp1P56183 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.82□□□□□ -0.04
Rrp1P56183 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.82□□□□□ -0.04
Rrp1P56183 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.82□□□□□ -0.04
Rrp1P56183 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.82□□□□□ -0.04
Rrp1P56183 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.82□□□□□ -0.04
Rrp1P56183 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.82□□□□□ -0.04
Rrp1P56183 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.82□□□□□ -0.04
Rrp1P56183 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.82□□□□□ -0.04
Rrp1P56183 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.82□□□□□ -0.04
Rrp1P56183 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rrp1P56183 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rrp1P56183 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.82□□□□□ -0.04
Rrp1P56183 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rrp1P56183 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rrp1P56183 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp1P56183 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.81□□□□□ -0.04
Rrp1P56183 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp1P56183 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp1P56183 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rrp1P56183 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rrp1P56183 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.81□□□□□ -0.04
Rrp1P56183 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp1P56183 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Rrp1P56183 Gm11524-201ENSMUST00000119349 807 ntBASIC14.81□□□□□ -0.04
Rrp1P56183 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp1P56183 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp1P56183 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rrp1P56183 Gm27989-201ENSMUST00000184721 107 ntBASIC14.81□□□□□ -0.04
Rrp1P56183 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.81□□□□□ -0.04
Rrp1P56183 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms