Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Gm24830-201ENSMUST00000102024 166 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.06□□□□□ -0.32
Atxn1P54254 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.06□□□□□ -0.32
Atxn1P54254 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Atxn1P54254 Gm25890-201ENSMUST00000177643 165 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Gm22614-201ENSMUST00000178300 165 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.06□□□□□ -0.32
Atxn1P54254 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Atxn1P54254 Gm22042-201ENSMUST00000082989 165 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Gm26232-201ENSMUST00000083360 166 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Gm24136-201ENSMUST00000083374 165 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Gm26110-201ENSMUST00000083971 165 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Atxn1P54254 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Atxn1P54254 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.05□□□□□ -0.32
Atxn1P54254 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Atxn1P54254 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.05□□□□□ -0.32
Atxn1P54254 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Atxn1P54254 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Gm11439-201ENSMUST00000118598 409 ntBASIC13.05□□□□□ -0.32
Atxn1P54254 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.05□□□□□ -0.32
Atxn1P54254 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Atxn1P54254 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.05□□□□□ -0.32
Atxn1P54254 Gm18212-201ENSMUST00000211678 889 ntBASIC13.05□□□□□ -0.32
Atxn1P54254 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Atxn1P54254 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.05□□□□□ -0.32
Atxn1P54254 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Atxn1P54254 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Atxn1P54254 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.05□□□□□ -0.32
Atxn1P54254 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Atxn1P54254 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Atxn1P54254 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Atxn1P54254 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.04□□□□□ -0.32
Atxn1P54254 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.04□□□□□ -0.32
Atxn1P54254 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Atxn1P54254 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Atxn1P54254 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Gm14028-201ENSMUST00000117434 479 ntBASIC13.04□□□□□ -0.32
Atxn1P54254 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Gm11964-201ENSMUST00000120982 444 ntBASIC13.04□□□□□ -0.32
Atxn1P54254 Gm14277-201ENSMUST00000121195 360 ntBASIC13.04□□□□□ -0.32
Atxn1P54254 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.04□□□□□ -0.32
Atxn1P54254 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.04□□□□□ -0.32
Atxn1P54254 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.04□□□□□ -0.32
Atxn1P54254 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Atxn1P54254 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.04□□□□□ -0.32
Atxn1P54254 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms