Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cux1P53564 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cux1P53564 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cux1P53564 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cux1P53564 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cux1P53564 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cux1P53564 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cux1P53564 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Cux1P53564 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Cux1P53564 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC19.86■□□□□ 0.77
Cux1P53564 Gm23699-201ENSMUST00000158835 135 ntBASIC19.86■□□□□ 0.77
Cux1P53564 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC19.86■□□□□ 0.77
Cux1P53564 Gm18556-201ENSMUST00000219748 1031 ntBASIC19.86■□□□□ 0.77
Cux1P53564 AC154680.1-201ENSMUST00000224376 859 ntBASIC19.86■□□□□ 0.77
Cux1P53564 Dhrs4-202ENSMUST00000226168 828 ntBASIC19.86■□□□□ 0.77
Cux1P53564 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC19.86■□□□□ 0.77
Cux1P53564 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cux1P53564 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Cux1P53564 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC19.86■□□□□ 0.77
Cux1P53564 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC19.86■□□□□ 0.77
Cux1P53564 Gm13813-201ENSMUST00000120998 787 ntBASIC19.86■□□□□ 0.77
Cux1P53564 Gm5616-201ENSMUST00000165252 384 ntBASIC19.86■□□□□ 0.77
Cux1P53564 Gm8741-201ENSMUST00000174736 384 ntBASIC19.86■□□□□ 0.77
Cux1P53564 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC19.86■□□□□ 0.77
Cux1P53564 Gm42997-202ENSMUST00000200321 985 ntBASIC19.86■□□□□ 0.77
Cux1P53564 AU022133-201ENSMUST00000200601 873 ntBASIC19.86■□□□□ 0.77
Cux1P53564 Gm18393-201ENSMUST00000208349 1131 ntBASIC19.86■□□□□ 0.77
Cux1P53564 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cux1P53564 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC19.85■□□□□ 0.77
Cux1P53564 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cux1P53564 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC19.85■□□□□ 0.77
Cux1P53564 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Cux1P53564 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cux1P53564 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Gm13394-201ENSMUST00000121658 1000 ntBASIC19.85■□□□□ 0.77
Cux1P53564 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC19.85■□□□□ 0.77
Cux1P53564 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Cux1P53564 Gm7848-201ENSMUST00000210739 718 ntBASIC19.85■□□□□ 0.77
Cux1P53564 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC19.85■□□□□ 0.77
Cux1P53564 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cux1P53564 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cux1P53564 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Gm42769-201ENSMUST00000198576 1659 ntBASIC19.84■□□□□ 0.77
Cux1P53564 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Cux1P53564 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC19.84■□□□□ 0.77
Cux1P53564 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Gm7207-201ENSMUST00000211575 1067 ntBASIC19.84■□□□□ 0.77
Cux1P53564 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC19.84■□□□□ 0.77
Cux1P53564 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cux1P53564 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Cux1P53564 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cux1P53564 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cux1P53564 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.83■□□□□ 0.77
Cux1P53564 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cux1P53564 Gm13045-201ENSMUST00000119019 712 ntBASIC19.83■□□□□ 0.77
Cux1P53564 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC19.83■□□□□ 0.77
Cux1P53564 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cux1P53564 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cux1P53564 Gm8285-201ENSMUST00000208293 759 ntBASIC19.83■□□□□ 0.77
Cux1P53564 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms