Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.45□□□□□ -0.42
RoraP51448 Gm18054-201ENSMUST00000207539 555 ntBASIC12.45□□□□□ -0.42
RoraP51448 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.45□□□□□ -0.42
RoraP51448 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RoraP51448 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RoraP51448 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RoraP51448 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.45□□□□□ -0.42
RoraP51448 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RoraP51448 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
RoraP51448 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.45□□□□□ -0.42
RoraP51448 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RoraP51448 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RoraP51448 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.44□□□□□ -0.42
RoraP51448 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.44□□□□□ -0.42
RoraP51448 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.44□□□□□ -0.42
RoraP51448 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.44□□□□□ -0.42
RoraP51448 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.44□□□□□ -0.42
RoraP51448 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.44□□□□□ -0.42
RoraP51448 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
RoraP51448 Gm7029-201ENSMUST00000173226 450 ntBASIC12.44□□□□□ -0.42
RoraP51448 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.44□□□□□ -0.42
RoraP51448 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Gm10268-201ENSMUST00000085340 555 ntBASIC12.44□□□□□ -0.42
RoraP51448 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RoraP51448 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.44□□□□□ -0.42
RoraP51448 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.44□□□□□ -0.42
RoraP51448 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RoraP51448 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RoraP51448 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RoraP51448 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RoraP51448 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RoraP51448 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RoraP51448 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RoraP51448 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.43□□□□□ -0.42
RoraP51448 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RoraP51448 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RoraP51448 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.43□□□□□ -0.42
RoraP51448 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RoraP51448 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 252.6 ms