Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SftpdP50404 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SftpdP50404 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.84□□□□□ -0.19
SftpdP50404 Gm11978-201ENSMUST00000122315 466 ntBASIC13.84□□□□□ -0.19
SftpdP50404 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.84□□□□□ -0.19
SftpdP50404 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SftpdP50404 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.84□□□□□ -0.19
SftpdP50404 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.84□□□□□ -0.19
SftpdP50404 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SftpdP50404 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SftpdP50404 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.84□□□□□ -0.19
SftpdP50404 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SftpdP50404 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.84□□□□□ -0.19
SftpdP50404 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SftpdP50404 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SftpdP50404 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SftpdP50404 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.84□□□□□ -0.19
SftpdP50404 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpdP50404 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SftpdP50404 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SftpdP50404 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SftpdP50404 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SftpdP50404 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.83□□□□□ -0.2
SftpdP50404 Gm8213-201ENSMUST00000118191 441 ntBASIC13.83□□□□□ -0.2
SftpdP50404 Gm11803-201ENSMUST00000119966 444 ntBASIC13.83□□□□□ -0.2
SftpdP50404 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.83□□□□□ -0.2
SftpdP50404 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.83□□□□□ -0.2
SftpdP50404 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.83□□□□□ -0.2
SftpdP50404 Gm27486-201ENSMUST00000184923 80 ntBASIC13.83□□□□□ -0.2
SftpdP50404 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.83□□□□□ -0.2
SftpdP50404 Gm5035-201ENSMUST00000215581 927 ntBASIC13.83□□□□□ -0.2
SftpdP50404 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.83□□□□□ -0.2
SftpdP50404 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.83□□□□□ -0.2
SftpdP50404 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.83□□□□□ -0.2
SftpdP50404 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SftpdP50404 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SftpdP50404 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.83□□□□□ -0.2
SftpdP50404 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpdP50404 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SftpdP50404 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SftpdP50404 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.82□□□□□ -0.2
SftpdP50404 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.82□□□□□ -0.2
SftpdP50404 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.82□□□□□ -0.2
SftpdP50404 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SftpdP50404 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SftpdP50404 Gm11618-201ENSMUST00000117946 267 ntBASIC13.82□□□□□ -0.2
SftpdP50404 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms