Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm6415-201ENSMUST00000118488 348 ntBASIC12.64□□□□□ -0.39
Prox1P48437 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.64□□□□□ -0.39
Prox1P48437 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Gm4804-201ENSMUST00000182234 999 ntBASIC12.64□□□□□ -0.39
Prox1P48437 Gm9229-201ENSMUST00000222777 126 ntBASIC12.64□□□□□ -0.39
Prox1P48437 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.64□□□□□ -0.39
Prox1P48437 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Prox1P48437 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.64□□□□□ -0.39
Prox1P48437 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.64□□□□□ -0.39
Prox1P48437 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Prox1P48437 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.63□□□□□ -0.39
Prox1P48437 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Prox1P48437 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Prox1P48437 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.63□□□□□ -0.39
Prox1P48437 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Gm15393-201ENSMUST00000120499 219 ntBASIC12.63□□□□□ -0.39
Prox1P48437 Gm13385-201ENSMUST00000121089 220 ntBASIC12.63□□□□□ -0.39
Prox1P48437 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.63□□□□□ -0.39
Prox1P48437 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Prox1P48437 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Prox1P48437 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Prox1P48437 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Prox1P48437 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.63□□□□□ -0.39
Prox1P48437 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Prox1P48437 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Prox1P48437 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Prox1P48437 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prox1P48437 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Prox1P48437 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.62□□□□□ -0.39
Prox1P48437 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.62□□□□□ -0.39
Prox1P48437 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.62□□□□□ -0.39
Prox1P48437 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Prox1P48437 Gm28630-201ENSMUST00000187806 498 ntBASIC12.62□□□□□ -0.39
Prox1P48437 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Gm5425-201ENSMUST00000214125 459 ntBASIC12.62□□□□□ -0.39
Prox1P48437 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.62□□□□□ -0.39
Prox1P48437 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.62□□□□□ -0.39
Prox1P48437 Shd-206ENSMUST00000225145 998 ntBASIC12.62□□□□□ -0.39
Prox1P48437 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prox1P48437 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms