Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
Sox2P48432 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Sox2P48432 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Sox2P48432 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox2P48432 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Sox2P48432 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox2P48432 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.31□□□□□ -0.44
Sox2P48432 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.31□□□□□ -0.44
Sox2P48432 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Sox2P48432 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox2P48432 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Sox2P48432 Gm43703-201ENSMUST00000200523 763 ntBASIC12.31□□□□□ -0.44
Sox2P48432 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox2P48432 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox2P48432 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox2P48432 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox2P48432 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.31□□□□□ -0.44
Sox2P48432 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox2P48432 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.31□□□□□ -0.44
Sox2P48432 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Sox2P48432 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox2P48432 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox2P48432 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sox2P48432 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Pck2-205ENSMUST00000226352 2784 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox2P48432 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sox2P48432 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Sox2P48432 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm12403-201ENSMUST00000121384 959 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox2P48432 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox2P48432 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.3□□□□□ -0.44
Sox2P48432 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox2P48432 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox2P48432 Gm18905-201ENSMUST00000205454 928 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox2P48432 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox2P48432 Gm17330-201ENSMUST00000221047 165 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.3□□□□□ -0.44
Sox2P48432 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sox2P48432 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sox2P48432 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sox2P48432 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox2P48432 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox2P48432 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox2P48432 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms