Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps4bP46467 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Vps4bP46467 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Vps4bP46467 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vps4bP46467 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.37□□□□□ -0.27
Vps4bP46467 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.37□□□□□ -0.27
Vps4bP46467 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.37□□□□□ -0.27
Vps4bP46467 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vps4bP46467 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.37□□□□□ -0.27
Vps4bP46467 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.37□□□□□ -0.27
Vps4bP46467 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vps4bP46467 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps4bP46467 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
Vps4bP46467 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Vps4bP46467 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps4bP46467 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Vps4bP46467 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps4bP46467 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.36□□□□□ -0.27
Vps4bP46467 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Vps4bP46467 Gm15376-201ENSMUST00000122258 783 ntBASIC13.36□□□□□ -0.27
Vps4bP46467 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.36□□□□□ -0.27
Vps4bP46467 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Gm42550-201ENSMUST00000201553 960 ntBASIC13.36□□□□□ -0.27
Vps4bP46467 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps4bP46467 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps4bP46467 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Syt7-204ENSMUST00000223586 1344 ntBASIC13.36□□□□□ -0.27
Vps4bP46467 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps4bP46467 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vps4bP46467 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps4bP46467 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Vps4bP46467 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps4bP46467 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vps4bP46467 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Vps4bP46467 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.35□□□□□ -0.27
Vps4bP46467 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Gm5354-201ENSMUST00000182417 973 ntBASIC13.35□□□□□ -0.27
Vps4bP46467 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.35□□□□□ -0.27
Vps4bP46467 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.35□□□□□ -0.27
Vps4bP46467 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vps4bP46467 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps4bP46467 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps4bP46467 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps4bP46467 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps4bP46467 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Vps4bP46467 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms