Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.59□□□□□ -0.23
HttP42859 Gm11989-201ENSMUST00000117240 672 ntBASIC13.59□□□□□ -0.23
HttP42859 Gm11362-201ENSMUST00000118838 850 ntBASIC13.59□□□□□ -0.23
HttP42859 Gm18059-201ENSMUST00000208073 580 ntBASIC13.59□□□□□ -0.23
HttP42859 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.59□□□□□ -0.23
HttP42859 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
HttP42859 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HttP42859 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HttP42859 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.59□□□□□ -0.23
HttP42859 Gm14724-201ENSMUST00000118400 537 ntBASIC13.59□□□□□ -0.23
HttP42859 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HttP42859 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.59□□□□□ -0.23
HttP42859 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HttP42859 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HttP42859 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
HttP42859 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.59□□□□□ -0.23
HttP42859 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
HttP42859 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
HttP42859 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HttP42859 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HttP42859 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.58□□□□□ -0.23
HttP42859 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.58□□□□□ -0.24
HttP42859 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.58□□□□□ -0.24
HttP42859 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.58□□□□□ -0.24
HttP42859 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Gm21092-201ENSMUST00000178995 955 ntBASIC13.58□□□□□ -0.24
HttP42859 Gm27910-201ENSMUST00000185004 107 ntBASIC13.58□□□□□ -0.24
HttP42859 Gm9230-201ENSMUST00000188228 532 ntBASIC13.58□□□□□ -0.24
HttP42859 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.58□□□□□ -0.24
HttP42859 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HttP42859 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HttP42859 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
HttP42859 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Gm42511-201ENSMUST00000196160 234 ntBASIC13.58□□□□□ -0.24
HttP42859 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.58□□□□□ -0.24
HttP42859 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC13.58□□□□□ -0.24
HttP42859 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HttP42859 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HttP42859 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HttP42859 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.58□□□□□ -0.24
HttP42859 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
HttP42859 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
HttP42859 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.57□□□□□ -0.24
HttP42859 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.57□□□□□ -0.24
HttP42859 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
HttP42859 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.57□□□□□ -0.24
HttP42859 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.57□□□□□ -0.24
HttP42859 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Gm15744-201ENSMUST00000161734 213 ntBASIC13.57□□□□□ -0.24
HttP42859 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.57□□□□□ -0.24
HttP42859 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.57□□□□□ -0.24
HttP42859 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
HttP42859 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms