Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Gm12585-201ENSMUST00000117307 290 ntBASIC13.11□□□□□ -0.31
LdlrP35951 Gm15240-201ENSMUST00000118156 720 ntBASIC13.11□□□□□ -0.31
LdlrP35951 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.11□□□□□ -0.31
LdlrP35951 Gm43630-201ENSMUST00000201550 776 ntBASIC13.11□□□□□ -0.31
LdlrP35951 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.11□□□□□ -0.31
LdlrP35951 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.11□□□□□ -0.31
LdlrP35951 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LdlrP35951 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LdlrP35951 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.11□□□□□ -0.31
LdlrP35951 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LdlrP35951 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.11□□□□□ -0.31
LdlrP35951 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
LdlrP35951 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.11□□□□□ -0.31
LdlrP35951 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LdlrP35951 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
LdlrP35951 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LdlrP35951 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LdlrP35951 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.1□□□□□ -0.31
LdlrP35951 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.1□□□□□ -0.31
LdlrP35951 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
LdlrP35951 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LdlrP35951 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
LdlrP35951 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.1□□□□□ -0.31
LdlrP35951 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.1□□□□□ -0.31
LdlrP35951 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LdlrP35951 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LdlrP35951 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.1□□□□□ -0.31
LdlrP35951 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.1□□□□□ -0.31
LdlrP35951 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
LdlrP35951 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.1□□□□□ -0.31
LdlrP35951 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LdlrP35951 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LdlrP35951 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.1□□□□□ -0.31
LdlrP35951 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LdlrP35951 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.09□□□□□ -0.31
LdlrP35951 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LdlrP35951 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.09□□□□□ -0.31
LdlrP35951 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LdlrP35951 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LdlrP35951 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LdlrP35951 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LdlrP35951 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.09□□□□□ -0.31
LdlrP35951 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LdlrP35951 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.09□□□□□ -0.31
LdlrP35951 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LdlrP35951 Gm9002-201ENSMUST00000178437 499 ntBASIC13.09□□□□□ -0.31
LdlrP35951 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.09□□□□□ -0.31
LdlrP35951 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LdlrP35951 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms