Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cd28P31041 Gm15393-201ENSMUST00000120499 219 ntBASIC11.57□□□□□ -0.56
Cd28P31041 Gm15467-201ENSMUST00000120582 445 ntBASIC11.57□□□□□ -0.56
Cd28P31041 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.57□□□□□ -0.56
Cd28P31041 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.57□□□□□ -0.56
Cd28P31041 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.57□□□□□ -0.56
Cd28P31041 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Mir6990-201ENSMUST00000183724 91 ntBASIC11.57□□□□□ -0.56
Cd28P31041 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.57□□□□□ -0.56
Cd28P31041 Gm5425-201ENSMUST00000214125 459 ntBASIC11.57□□□□□ -0.56
Cd28P31041 Gm9229-201ENSMUST00000222777 126 ntBASIC11.57□□□□□ -0.56
Cd28P31041 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.57□□□□□ -0.56
Cd28P31041 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cd28P31041 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Cd28P31041 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd28P31041 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cd28P31041 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.56□□□□□ -0.56
Cd28P31041 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cd28P31041 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Gm15653-201ENSMUST00000119247 907 ntBASIC11.56□□□□□ -0.56
Cd28P31041 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.56□□□□□ -0.56
Cd28P31041 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.56□□□□□ -0.56
Cd28P31041 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.56□□□□□ -0.56
Cd28P31041 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Cd28P31041 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cd28P31041 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd28P31041 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.55□□□□□ -0.56
Cd28P31041 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Cd28P31041 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Cd28P31041 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.55□□□□□ -0.56
Cd28P31041 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.55□□□□□ -0.56
Cd28P31041 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cd28P31041 Gm11779-201ENSMUST00000118541 368 ntBASIC11.55□□□□□ -0.56
Cd28P31041 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.55□□□□□ -0.56
Cd28P31041 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.55□□□□□ -0.56
Cd28P31041 Gm24158-201ENSMUST00000175263 71 ntBASIC11.55□□□□□ -0.56
Cd28P31041 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cd28P31041 Gm10766-202ENSMUST00000194123 606 ntBASIC11.55□□□□□ -0.56
Cd28P31041 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.55□□□□□ -0.56
Cd28P31041 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cd28P31041 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cd28P31041 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cd28P31041 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cd28P31041 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd28P31041 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms