Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hoxc8P09025 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Hoxc8P09025 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.89□□□□□ -0.19
Hoxc8P09025 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.89□□□□□ -0.19
Hoxc8P09025 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxc8P09025 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.89□□□□□ -0.19
Hoxc8P09025 Gm14208-201ENSMUST00000119645 678 ntBASIC13.89□□□□□ -0.19
Hoxc8P09025 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Gm3786-201ENSMUST00000202659 378 ntBASIC13.89□□□□□ -0.19
Hoxc8P09025 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Hoxc8P09025 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxc8P09025 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Hoxc8P09025 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Hoxc8P09025 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.88□□□□□ -0.19
Hoxc8P09025 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.88□□□□□ -0.19
Hoxc8P09025 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxc8P09025 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hoxc8P09025 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hoxc8P09025 Gm14832-201ENSMUST00000121289 322 ntBASIC13.88□□□□□ -0.19
Hoxc8P09025 Gm26361-201ENSMUST00000158868 186 ntBASIC13.88□□□□□ -0.19
Hoxc8P09025 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Gm25732-201ENSMUST00000175168 60 ntBASIC13.88□□□□□ -0.19
Hoxc8P09025 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.88□□□□□ -0.19
Hoxc8P09025 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxc8P09025 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxc8P09025 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.88□□□□□ -0.19
Hoxc8P09025 Nsd1-205ENSMUST00000224693 852 ntBASIC13.88□□□□□ -0.19
Hoxc8P09025 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.88□□□□□ -0.19
Hoxc8P09025 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hoxc8P09025 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxc8P09025 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxc8P09025 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxc8P09025 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.87□□□□□ -0.19
Hoxc8P09025 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hoxc8P09025 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Hoxc8P09025 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.87□□□□□ -0.19
Hoxc8P09025 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Hoxc8P09025 Gm13996-201ENSMUST00000118456 430 ntBASIC13.87□□□□□ -0.19
Hoxc8P09025 Gm13813-201ENSMUST00000120998 787 ntBASIC13.87□□□□□ -0.19
Hoxc8P09025 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.87□□□□□ -0.19
Hoxc8P09025 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc8P09025 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.87□□□□□ -0.19
Hoxc8P09025 Gm25700-201ENSMUST00000177693 110 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms