Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.62□□□□□ -0.39
Hcn1O88704 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Gm18307-201ENSMUST00000206864 949 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Gm9908-201ENSMUST00000211534 448 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Gm7653-201ENSMUST00000214567 508 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.62□□□□□ -0.39
Hcn1O88704 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Hcn1O88704 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.62□□□□□ -0.39
Hcn1O88704 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hcn1O88704 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hcn1O88704 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hcn1O88704 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hcn1O88704 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hcn1O88704 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.61□□□□□ -0.39
Hcn1O88704 Gm12485-201ENSMUST00000119641 291 ntBASIC12.61□□□□□ -0.39
Hcn1O88704 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.61□□□□□ -0.39
Hcn1O88704 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hcn1O88704 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.61□□□□□ -0.39
Hcn1O88704 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.61□□□□□ -0.39
Hcn1O88704 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.61□□□□□ -0.39
Hcn1O88704 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.61□□□□□ -0.39
Hcn1O88704 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Hcn1O88704 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Hcn1O88704 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hcn1O88704 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.61□□□□□ -0.39
Hcn1O88704 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.6□□□□□ -0.39
Hcn1O88704 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.6□□□□□ -0.39
Hcn1O88704 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hcn1O88704 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.6□□□□□ -0.39
Hcn1O88704 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.6□□□□□ -0.39
Hcn1O88704 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hcn1O88704 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hcn1O88704 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hcn1O88704 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.6□□□□□ -0.39
Hcn1O88704 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcn1O88704 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcn1O88704 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcn1O88704 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcn1O88704 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hcn1O88704 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcn1O88704 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hcn1O88704 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hcn1O88704 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.59□□□□□ -0.39
Hcn1O88704 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
Hcn1O88704 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hcn1O88704 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms