Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tspan6O70401 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tspan6O70401 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tspan6O70401 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tspan6O70401 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tspan6O70401 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tspan6O70401 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tspan6O70401 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Tspan6O70401 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tspan6O70401 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tspan6O70401 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.8□□□□□ -0.36
Tspan6O70401 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tspan6O70401 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tspan6O70401 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tspan6O70401 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.8□□□□□ -0.36
Tspan6O70401 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.8□□□□□ -0.36
Tspan6O70401 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.8□□□□□ -0.36
Tspan6O70401 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Tspan6O70401 Gm6621-201ENSMUST00000193251 772 ntBASIC12.8□□□□□ -0.36
Tspan6O70401 Gm21769-201ENSMUST00000211922 111 ntBASIC12.8□□□□□ -0.36
Tspan6O70401 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tspan6O70401 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tspan6O70401 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Tspan6O70401 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.8□□□□□ -0.36
Tspan6O70401 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tspan6O70401 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tspan6O70401 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.79□□□□□ -0.36
Tspan6O70401 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tspan6O70401 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Tspan6O70401 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Tspan6O70401 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tspan6O70401 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.79□□□□□ -0.36
Tspan6O70401 Gm14381-201ENSMUST00000122105 414 ntBASIC12.79□□□□□ -0.36
Tspan6O70401 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.79□□□□□ -0.36
Tspan6O70401 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.79□□□□□ -0.36
Tspan6O70401 Mir7221-201ENSMUST00000184009 72 ntBASIC12.79□□□□□ -0.36
Tspan6O70401 Gm27320-201ENSMUST00000184892 109 ntBASIC12.79□□□□□ -0.36
Tspan6O70401 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.79□□□□□ -0.36
Tspan6O70401 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.79□□□□□ -0.36
Tspan6O70401 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.79□□□□□ -0.36
Tspan6O70401 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.79□□□□□ -0.36
Tspan6O70401 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Tspan6O70401 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.79□□□□□ -0.36
Tspan6O70401 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.79□□□□□ -0.36
Tspan6O70401 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Tspan6O70401 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.79□□□□□ -0.36
Tspan6O70401 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Tspan6O70401 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.79□□□□□ -0.36
Tspan6O70401 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tspan6O70401 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tspan6O70401 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tspan6O70401 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tspan6O70401 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tspan6O70401 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms