Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Alx3O70137 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Alx3O70137 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.09□□□□□ -0.47
Alx3O70137 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.09□□□□□ -0.47
Alx3O70137 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Alx3O70137 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Alx3O70137 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Gm649-201ENSMUST00000117284 1054 ntBASIC12.09□□□□□ -0.47
Alx3O70137 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.09□□□□□ -0.47
Alx3O70137 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Alx3O70137 Gm17837-201ENSMUST00000186435 985 ntBASIC12.09□□□□□ -0.47
Alx3O70137 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Alx3O70137 Gm5186-201ENSMUST00000218781 920 ntBASIC12.09□□□□□ -0.47
Alx3O70137 AC154757.2-201ENSMUST00000228885 743 ntBASIC12.09□□□□□ -0.47
Alx3O70137 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Alx3O70137 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.09□□□□□ -0.47
Alx3O70137 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Alx3O70137 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Alx3O70137 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.09□□□□□ -0.47
Alx3O70137 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Alx3O70137 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Alx3O70137 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Alx3O70137 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Alx3O70137 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Alx3O70137 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.08□□□□□ -0.48
Alx3O70137 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Gm13223-201ENSMUST00000118609 747 ntBASIC12.08□□□□□ -0.48
Alx3O70137 Gm13616-201ENSMUST00000120600 222 ntBASIC12.08□□□□□ -0.48
Alx3O70137 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC12.08□□□□□ -0.48
Alx3O70137 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC12.08□□□□□ -0.48
Alx3O70137 Gm45610-201ENSMUST00000209227 784 ntBASIC12.08□□□□□ -0.48
Alx3O70137 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.08□□□□□ -0.48
Alx3O70137 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.08□□□□□ -0.48
Alx3O70137 Gm17330-201ENSMUST00000221047 165 ntBASIC12.08□□□□□ -0.48
Alx3O70137 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.08□□□□□ -0.48
Alx3O70137 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Alx3O70137 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.08□□□□□ -0.48
Alx3O70137 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Alx3O70137 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.08□□□□□ -0.48
Alx3O70137 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.08□□□□□ -0.48
Alx3O70137 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Alx3O70137 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms