Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.22□□□□□ -0.45
BckdkO55028 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Gm11814-201ENSMUST00000119515 929 ntBASIC12.22□□□□□ -0.45
BckdkO55028 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.22□□□□□ -0.45
BckdkO55028 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.22□□□□□ -0.45
BckdkO55028 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
BckdkO55028 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.22□□□□□ -0.45
BckdkO55028 Gm7287-201ENSMUST00000205267 602 ntBASIC12.22□□□□□ -0.45
BckdkO55028 Gm8463-201ENSMUST00000208573 613 ntBASIC12.22□□□□□ -0.45
BckdkO55028 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
BckdkO55028 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.22□□□□□ -0.45
BckdkO55028 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
BckdkO55028 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
BckdkO55028 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
BckdkO55028 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
BckdkO55028 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
BckdkO55028 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
BckdkO55028 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.21□□□□□ -0.45
BckdkO55028 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.21□□□□□ -0.45
BckdkO55028 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.21□□□□□ -0.45
BckdkO55028 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
BckdkO55028 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.21□□□□□ -0.45
BckdkO55028 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.21□□□□□ -0.45
BckdkO55028 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.21□□□□□ -0.45
BckdkO55028 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
BckdkO55028 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BckdkO55028 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
BckdkO55028 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.21□□□□□ -0.46
BckdkO55028 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
BckdkO55028 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
BckdkO55028 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.21□□□□□ -0.46
BckdkO55028 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
BckdkO55028 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
BckdkO55028 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
BckdkO55028 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
BckdkO55028 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
BckdkO55028 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
BckdkO55028 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
BckdkO55028 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.2□□□□□ -0.46
BckdkO55028 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.2□□□□□ -0.46
BckdkO55028 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.2□□□□□ -0.46
BckdkO55028 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.2□□□□□ -0.46
BckdkO55028 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
BckdkO55028 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
BckdkO55028 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms