Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.13□□□□□ -0.15
Nr1i3O35627 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.13□□□□□ -0.15
Nr1i3O35627 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Gm12341-201ENSMUST00000119724 503 ntBASIC14.13□□□□□ -0.15
Nr1i3O35627 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.13□□□□□ -0.15
Nr1i3O35627 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.13□□□□□ -0.15
Nr1i3O35627 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.13□□□□□ -0.15
Nr1i3O35627 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.13□□□□□ -0.15
Nr1i3O35627 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.13□□□□□ -0.15
Nr1i3O35627 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Nr1i3O35627 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.13□□□□□ -0.15
Nr1i3O35627 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nr1i3O35627 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.13□□□□□ -0.15
Nr1i3O35627 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nr1i3O35627 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Nr1i3O35627 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.12□□□□□ -0.15
Nr1i3O35627 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.12□□□□□ -0.15
Nr1i3O35627 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nr1i3O35627 Gm18307-201ENSMUST00000206864 949 ntBASIC14.12□□□□□ -0.15
Nr1i3O35627 Itm2b-204ENSMUST00000228637 783 ntBASIC14.12□□□□□ -0.15
Nr1i3O35627 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.12□□□□□ -0.15
Nr1i3O35627 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.12□□□□□ -0.15
Nr1i3O35627 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.12□□□□□ -0.15
Nr1i3O35627 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.12□□□□□ -0.15
Nr1i3O35627 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nr1i3O35627 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Gm16215-201ENSMUST00000161990 637 ntBASIC14.11□□□□□ -0.15
Nr1i3O35627 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Mir7654-201ENSMUST00000185082 70 ntBASIC14.11□□□□□ -0.15
Nr1i3O35627 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nr1i3O35627 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.11□□□□□ -0.15
Nr1i3O35627 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.1□□□□□ -0.15
Nr1i3O35627 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms