Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Polr1aO35134 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Gm13812-201ENSMUST00000118061 1347 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm13810-201ENSMUST00000118584 1347 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Polr1aO35134 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Polr1aO35134 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Polr1aO35134 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Polr1aO35134 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Polr1aO35134 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Polr1aO35134 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Polr1aO35134 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Polr1aO35134 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Polr1aO35134 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Polr1aO35134 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC19.83■□□□□ 0.77
Polr1aO35134 Gm37835-201ENSMUST00000193305 361 ntBASIC19.83■□□□□ 0.77
Polr1aO35134 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Polr1aO35134 Gm9996-201ENSMUST00000070359 913 ntBASIC19.83■□□□□ 0.77
Polr1aO35134 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Polr1aO35134 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Polr1aO35134 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Polr1aO35134 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Polr1aO35134 AC159308.2-201ENSMUST00000213592 2325 ntBASIC19.83■□□□□ 0.76
Polr1aO35134 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Polr1aO35134 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Polr1aO35134 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC19.83■□□□□ 0.76
Polr1aO35134 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Polr1aO35134 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Polr1aO35134 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC19.82■□□□□ 0.76
Polr1aO35134 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Polr1aO35134 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
Polr1aO35134 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Gm42769-201ENSMUST00000198576 1659 ntBASIC19.82■□□□□ 0.76
Polr1aO35134 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Polr1aO35134 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Polr1aO35134 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC19.82■□□□□ 0.76
Polr1aO35134 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC19.82■□□□□ 0.76
Polr1aO35134 Gm23699-201ENSMUST00000158835 135 ntBASIC19.82■□□□□ 0.76
Polr1aO35134 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC19.82■□□□□ 0.76
Polr1aO35134 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC19.82■□□□□ 0.76
Polr1aO35134 Gm5051-201ENSMUST00000204085 485 ntBASIC19.82■□□□□ 0.76
Polr1aO35134 Gm8285-201ENSMUST00000208293 759 ntBASIC19.82■□□□□ 0.76
Polr1aO35134 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Polr1aO35134 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Polr1aO35134 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Polr1aO35134 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC19.81■□□□□ 0.76
Polr1aO35134 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Gm23949-201ENSMUST00000104027 127 ntBASIC19.81■□□□□ 0.76
Polr1aO35134 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Polr1aO35134 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC19.81■□□□□ 0.76
Polr1aO35134 Gm11941-201ENSMUST00000119904 610 ntBASIC19.81■□□□□ 0.76
Polr1aO35134 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC19.81■□□□□ 0.76
Polr1aO35134 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Gm10051-201ENSMUST00000145209 414 ntBASIC19.81■□□□□ 0.76
Polr1aO35134 Gm9550-201ENSMUST00000161130 862 ntBASIC19.81■□□□□ 0.76
Polr1aO35134 Mir7032-201ENSMUST00000185154 79 ntBASIC19.81■□□□□ 0.76
Polr1aO35134 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC19.81■□□□□ 0.76
Polr1aO35134 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Polr1aO35134 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Polr1aO35134 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Polr1aO35134 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Polr1aO35134 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC19.8■□□□□ 0.76
Polr1aO35134 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Polr1aO35134 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC19.8■□□□□ 0.76
Polr1aO35134 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC19.8■□□□□ 0.76
Polr1aO35134 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Polr1aO35134 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Polr1aO35134 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr1aO35134 Gm18626-201ENSMUST00000221512 1409 ntBASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms