Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Gm5566-201ENSMUST00000116118 459 ntBASIC12.25□□□□□ -0.45
Hps1O08983 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.25□□□□□ -0.45
Hps1O08983 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.25□□□□□ -0.45
Hps1O08983 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.25□□□□□ -0.45
Hps1O08983 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hps1O08983 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hps1O08983 Gm29667-201ENSMUST00000190817 490 ntBASIC12.25□□□□□ -0.45
Hps1O08983 Gm29741-201ENSMUST00000192667 421 ntBASIC12.25□□□□□ -0.45
Hps1O08983 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.25□□□□□ -0.45
Hps1O08983 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.25□□□□□ -0.45
Hps1O08983 Gm9908-201ENSMUST00000211534 448 ntBASIC12.25□□□□□ -0.45
Hps1O08983 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.25□□□□□ -0.45
Hps1O08983 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hps1O08983 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hps1O08983 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hps1O08983 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.25□□□□□ -0.45
Hps1O08983 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hps1O08983 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.25□□□□□ -0.45
Hps1O08983 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hps1O08983 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Hps1O08983 Gm13829-201ENSMUST00000119600 138 ntBASIC12.24□□□□□ -0.45
Hps1O08983 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.24□□□□□ -0.45
Hps1O08983 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.24□□□□□ -0.45
Hps1O08983 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.24□□□□□ -0.45
Hps1O08983 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.24□□□□□ -0.45
Hps1O08983 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Gm18027-201ENSMUST00000218947 619 ntBASIC12.24□□□□□ -0.45
Hps1O08983 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hps1O08983 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hps1O08983 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.24□□□□□ -0.45
Hps1O08983 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.24□□□□□ -0.45
Hps1O08983 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hps1O08983 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Hps1O08983 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hps1O08983 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hps1O08983 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Hps1O08983 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hps1O08983 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hps1O08983 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms