Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.78□□□□□ -0.52
Shank1D3YZU1 Gm44069-201ENSMUST00000204898 506 ntBASIC11.78□□□□□ -0.52
Shank1D3YZU1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.78□□□□□ -0.52
Shank1D3YZU1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Shank1D3YZU1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Shank1D3YZU1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Gm8885-201ENSMUST00000189382 598 ntBASIC11.78□□□□□ -0.52
Shank1D3YZU1 Gm44967-201ENSMUST00000207047 631 ntBASIC11.78□□□□□ -0.52
Shank1D3YZU1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Shank1D3YZU1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shank1D3YZU1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shank1D3YZU1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.77□□□□□ -0.52
Shank1D3YZU1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Shank1D3YZU1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.77□□□□□ -0.52
Shank1D3YZU1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Shank1D3YZU1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shank1D3YZU1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shank1D3YZU1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shank1D3YZU1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shank1D3YZU1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Shank1D3YZU1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shank1D3YZU1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Shank1D3YZU1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.77□□□□□ -0.53
Shank1D3YZU1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.77□□□□□ -0.53
Shank1D3YZU1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Gm7467-201ENSMUST00000185173 652 ntBASIC11.77□□□□□ -0.53
Shank1D3YZU1 Gm31256-201ENSMUST00000194705 506 ntBASIC11.77□□□□□ -0.53
Shank1D3YZU1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.77□□□□□ -0.53
Shank1D3YZU1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.77□□□□□ -0.53
Shank1D3YZU1 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.77□□□□□ -0.53
Shank1D3YZU1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Shank1D3YZU1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.76□□□□□ -0.53
Shank1D3YZU1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms