Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Gm8756-201ENSMUST00000183250 929 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 Gm45594-201ENSMUST00000211717 241 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 AC153962.2-201ENSMUST00000219417 550 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.55□□□□□ -0.72
Chd6A3KFM7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Chd6A3KFM7 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.54□□□□□ -0.72
Chd6A3KFM7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Gm22388-201ENSMUST00000158194 248 ntBASIC10.54□□□□□ -0.72
Chd6A3KFM7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.54□□□□□ -0.72
Chd6A3KFM7 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Gm4604-201ENSMUST00000025040 390 ntBASIC10.54□□□□□ -0.72
Chd6A3KFM7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC10.54□□□□□ -0.72
Chd6A3KFM7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Gm10731-201ENSMUST00000181171 448 ntBASIC10.54□□□□□ -0.72
Chd6A3KFM7 Gm32999-201ENSMUST00000192693 562 ntBASIC10.54□□□□□ -0.72
Chd6A3KFM7 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.54□□□□□ -0.72
Chd6A3KFM7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Chd6A3KFM7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.53□□□□□ -0.72
Chd6A3KFM7 Mir698-201ENSMUST00000102164 109 ntBASIC10.53□□□□□ -0.72
Chd6A3KFM7 Gm12501-201ENSMUST00000119163 529 ntBASIC10.53□□□□□ -0.72
Chd6A3KFM7 Gm13019-201ENSMUST00000120000 276 ntBASIC10.53□□□□□ -0.72
Chd6A3KFM7 Gm14832-201ENSMUST00000121289 322 ntBASIC10.53□□□□□ -0.72
Chd6A3KFM7 Gm11978-201ENSMUST00000122315 466 ntBASIC10.53□□□□□ -0.72
Chd6A3KFM7 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Gm5733-201ENSMUST00000190232 939 ntBASIC10.53□□□□□ -0.72
Chd6A3KFM7 Gm19009-201ENSMUST00000223072 823 ntBASIC10.53□□□□□ -0.72
Chd6A3KFM7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.53□□□□□ -0.72
Chd6A3KFM7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.53□□□□□ -0.72
Chd6A3KFM7 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.53□□□□□ -0.72
Chd6A3KFM7 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chd6A3KFM7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms