Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Mir6956-201ENSMUST00000183598 62 ntBASIC10.79□□□□□ -0.68
Trav18A0A075B656 Gm29667-201ENSMUST00000190817 490 ntBASIC10.79□□□□□ -0.68
Trav18A0A075B656 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Gm9797-201ENSMUST00000052902 613 ntBASIC10.79□□□□□ -0.68
Trav18A0A075B656 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.79□□□□□ -0.68
Trav18A0A075B656 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav18A0A075B656 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.78□□□□□ -0.68
Trav18A0A075B656 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm26464-201ENSMUST00000157094 305 ntBASIC10.78□□□□□ -0.68
Trav18A0A075B656 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm5279-201ENSMUST00000199575 745 ntBASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.78□□□□□ -0.68
Trav18A0A075B656 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav18A0A075B656 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
Trav18A0A075B656 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav18A0A075B656 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav18A0A075B656 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Gm11524-201ENSMUST00000119349 807 ntBASIC10.77□□□□□ -0.69
Trav18A0A075B656 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav18A0A075B656 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Gm38144-201ENSMUST00000192790 465 ntBASIC10.77□□□□□ -0.69
Trav18A0A075B656 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Gm19078-201ENSMUST00000206311 727 ntBASIC10.77□□□□□ -0.69
Trav18A0A075B656 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.77□□□□□ -0.69
Trav18A0A075B656 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav18A0A075B656 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms