Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Gm11524-201ENSMUST00000119349 807 ntBASIC11.19□□□□□ -0.62
Gm3550W4VSN7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Gm19078-201ENSMUST00000206311 727 ntBASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.19□□□□□ -0.62
Gm3550W4VSN7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm15678-201ENSMUST00000117573 960 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm12403-201ENSMUST00000121384 959 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm26464-201ENSMUST00000157094 305 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Gm3550W4VSN7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm3550W4VSN7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm3550W4VSN7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.17□□□□□ -0.62
Gm3550W4VSN7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm3550W4VSN7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.17□□□□□ -0.62
Gm3550W4VSN7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
Gm3550W4VSN7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm3550W4VSN7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Gm3550W4VSN7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Gm3550W4VSN7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms