Protein–RNA interactions for Protein: Q9Z140

Cpne6, Copine-6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne6Q9Z140 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cpne6Q9Z140 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cpne6Q9Z140 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cpne6Q9Z140 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.83□□□□□ -0.35
Cpne6Q9Z140 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cpne6Q9Z140 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Gm4271-201ENSMUST00000174444 973 ntBASIC12.83□□□□□ -0.36
Cpne6Q9Z140 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.83□□□□□ -0.36
Cpne6Q9Z140 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.83□□□□□ -0.36
Cpne6Q9Z140 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne6Q9Z140 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Gm16372-201ENSMUST00000073088 450 ntBASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.82□□□□□ -0.36
Cpne6Q9Z140 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.81□□□□□ -0.36
Cpne6Q9Z140 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cpne6Q9Z140 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne6Q9Z140 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cpne6Q9Z140 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cpne6Q9Z140 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne6Q9Z140 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne6Q9Z140 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne6Q9Z140 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cpne6Q9Z140 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cpne6Q9Z140 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms