Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn9Q9Z0S7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Gm15429-201ENSMUST00000151268 798 ntBASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Itm2b-204ENSMUST00000228637 783 ntBASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn9Q9Z0S7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cldn9Q9Z0S7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldn9Q9Z0S7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms