Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Gm29608-201ENSMUST00000190444 463 ntBASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Gm38223-201ENSMUST00000194484 695 ntBASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Gm45668-201ENSMUST00000211271 493 ntBASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Gm13689-201ENSMUST00000119360 685 ntBASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ClcnkaQ9WUB7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Gm15371-201ENSMUST00000117057 784 ntBASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Gm18018-201ENSMUST00000198273 408 ntBASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
ClcnkaQ9WUB7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms