Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn8aQ9WTU3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Scn8aQ9WTU3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn8aQ9WTU3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn8aQ9WTU3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Scn8aQ9WTU3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.15□□□□□ -0.31
Scn8aQ9WTU3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Scn8aQ9WTU3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn8aQ9WTU3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn8aQ9WTU3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.31
Scn8aQ9WTU3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Gm13492-201ENSMUST00000119772 665 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Gm38092-201ENSMUST00000195600 653 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Gm42627-201ENSMUST00000197347 224 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Gm12241-201ENSMUST00000118330 726 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Gm16296-201ENSMUST00000159905 325 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Daam2-202ENSMUST00000224595 1926 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.14□□□□□ -0.31
Scn8aQ9WTU3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn8aQ9WTU3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms