Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Gm7287-201ENSMUST00000205267 602 ntBASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Atp6ap1Q9R1Q9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Atp6ap1Q9R1Q9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Atp6ap1Q9R1Q9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Atp6ap1Q9R1Q9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm15806-201ENSMUST00000120696 955 ntBASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm9002-201ENSMUST00000178437 499 ntBASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm7653-201ENSMUST00000214567 508 ntBASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Atp6ap1Q9R1Q9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm14350-201ENSMUST00000116642 640 ntBASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm16202-201ENSMUST00000117532 544 ntBASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm13612-201ENSMUST00000119276 390 ntBASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm17794-201ENSMUST00000220252 955 ntBASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Atp6ap1Q9R1Q9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms