Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm38223-201ENSMUST00000194484 695 ntBASIC12.84□□□□□ -0.35
Cdh17Q9R100 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdh17Q9R100 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.84□□□□□ -0.35
Cdh17Q9R100 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh17Q9R100 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Cdh17Q9R100 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdh17Q9R100 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdh17Q9R100 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdh17Q9R100 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.83□□□□□ -0.35
Cdh17Q9R100 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Cdh17Q9R100 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cdh17Q9R100 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Gm13689-201ENSMUST00000119360 685 ntBASIC12.83□□□□□ -0.36
Cdh17Q9R100 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Gm42612-201ENSMUST00000197986 623 ntBASIC12.83□□□□□ -0.36
Cdh17Q9R100 Gm43170-201ENSMUST00000199827 612 ntBASIC12.83□□□□□ -0.36
Cdh17Q9R100 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.83□□□□□ -0.36
Cdh17Q9R100 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh17Q9R100 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.82□□□□□ -0.36
Cdh17Q9R100 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.82□□□□□ -0.36
Cdh17Q9R100 Mir7023-201ENSMUST00000185093 64 ntBASIC12.82□□□□□ -0.36
Cdh17Q9R100 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.82□□□□□ -0.36
Cdh17Q9R100 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms