Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chaf1aQ9QWF0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Gm14057-201ENSMUST00000120631 482 ntBASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Gm18905-201ENSMUST00000205454 928 ntBASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chaf1aQ9QWF0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Chaf1aQ9QWF0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Gm15678-201ENSMUST00000117573 960 ntBASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Gm12151-201ENSMUST00000121374 290 ntBASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Gm25927-201ENSMUST00000175058 117 ntBASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Gm5425-201ENSMUST00000214125 459 ntBASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Chaf1aQ9QWF0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Mir6956-201ENSMUST00000183598 62 ntBASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chaf1aQ9QWF0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms