Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smco4Q9JIS3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Gm6433-201ENSMUST00000118634 875 ntBASIC10.51□□□□□ -0.73
Smco4Q9JIS3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Gm29518-201ENSMUST00000190858 372 ntBASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Smco4Q9JIS3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.51□□□□□ -0.73
Smco4Q9JIS3 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.5□□□□□ -0.73
Smco4Q9JIS3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms