Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Gm2231-201ENSMUST00000125661 612 ntBASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Gm7029-201ENSMUST00000173226 450 ntBASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Gm38002-201ENSMUST00000193255 180 ntBASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Gm43179-201ENSMUST00000198797 275 ntBASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rsph3bQ9DA80 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.46□□□□□ -0.1
Rsph3bQ9DA80 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rsph3bQ9DA80 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rsph3bQ9DA80 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.46□□□□□ -0.1
Rsph3bQ9DA80 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rsph3bQ9DA80 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rsph3bQ9DA80 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rsph3bQ9DA80 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rsph3bQ9DA80 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Rsph3bQ9DA80 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Rsph3bQ9DA80 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rsph3bQ9DA80 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Gm22018-201ENSMUST00000104357 131 ntBASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Mir1247-201ENSMUST00000116706 82 ntBASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Gm25927-201ENSMUST00000175058 117 ntBASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Gm19309-201ENSMUST00000218295 205 ntBASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rsph3bQ9DA80 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.43□□□□□ -0.1
Rsph3bQ9DA80 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms