Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Gm19931-201ENSMUST00000198920 368 ntBASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc89Q9DA73 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Gm15371-201ENSMUST00000117057 784 ntBASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Auts2-212ENSMUST00000178555 309 ntBASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Mir6977-201ENSMUST00000184960 64 ntBASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc89Q9DA73 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc89Q9DA73 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc89Q9DA73 Gm6447-201ENSMUST00000118905 835 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms