Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Gm15371-201ENSMUST00000117057 784 ntBASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Gm12341-201ENSMUST00000119724 503 ntBASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gtf3c6Q9D8P7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm27437-201ENSMUST00000183429 107 ntBASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Gtf3c6Q9D8P7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Gm7488-201ENSMUST00000117148 684 ntBASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Mir7654-201ENSMUST00000185082 70 ntBASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Gm45925-201ENSMUST00000218882 744 ntBASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Gm26315-201ENSMUST00000083890 321 ntBASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.18□□□□□ -0.14
Gtf3c6Q9D8P7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms