Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4bQ9D8B3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4bQ9D8B3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4bQ9D8B3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4bQ9D8B3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Gm6152-201ENSMUST00000151704 340 ntBASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4bQ9D8B3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp4bQ9D8B3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp4bQ9D8B3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp4bQ9D8B3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Chmp4bQ9D8B3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
Chmp4bQ9D8B3 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.58■□□□□ 0.25
Chmp4bQ9D8B3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp4bQ9D8B3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Chmp4bQ9D8B3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.58■□□□□ 0.25
Chmp4bQ9D8B3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp4bQ9D8B3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Gm8515-201ENSMUST00000194852 576 ntBASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp4bQ9D8B3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chmp4bQ9D8B3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp4bQ9D8B3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms