Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Rprl2-201ENSMUST00000157150 290 ntBASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Gm6916-202ENSMUST00000205523 195 ntBASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim42Q9D2H5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Mir3113-201ENSMUST00000175478 76 ntBASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Gm8927-201ENSMUST00000181978 981 ntBASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Gm3222-201ENSMUST00000071282 990 ntBASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Matn2-203ENSMUST00000226766 3252 ntBASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim42Q9D2H5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Gm15770-201ENSMUST00000117498 584 ntBASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Gm9719-201ENSMUST00000162765 543 ntBASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Mir7221-201ENSMUST00000184009 72 ntBASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Gm33320-201ENSMUST00000192232 530 ntBASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Trim42Q9D2H5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms