Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Gm24644-201ENSMUST00000157114 139 ntBASIC13.51□□□□□ -0.25
Vps28Q9D1C8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps28Q9D1C8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Gm10156-201ENSMUST00000122364 462 ntBASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Gm22331-201ENSMUST00000158066 136 ntBASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps28Q9D1C8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Gm14350-201ENSMUST00000116642 640 ntBASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Gm6447-201ENSMUST00000118905 835 ntBASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.49□□□□□ -0.25
Vps28Q9D1C8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms