Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.49□□□□□ -0.41
Upk1aQ9D132 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.49□□□□□ -0.41
Upk1aQ9D132 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm14701-201ENSMUST00000117156 348 ntBASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm22175-201ENSMUST00000175007 78 ntBASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm3436-201ENSMUST00000179930 840 ntBASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm27430-201ENSMUST00000184585 107 ntBASIC12.49□□□□□ -0.41
Upk1aQ9D132 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm44333-201ENSMUST00000197168 107 ntBASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm6888-201ENSMUST00000221983 706 ntBASIC12.49□□□□□ -0.41
Upk1aQ9D132 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upk1aQ9D132 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.48□□□□□ -0.41
Upk1aQ9D132 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.48□□□□□ -0.41
Upk1aQ9D132 Gm24447-201ENSMUST00000083977 338 ntBASIC12.48□□□□□ -0.41
Upk1aQ9D132 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.48□□□□□ -0.41
Upk1aQ9D132 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk1aQ9D132 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.47□□□□□ -0.41
Upk1aQ9D132 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.47□□□□□ -0.41
Upk1aQ9D132 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Gm14767-201ENSMUST00000121559 586 ntBASIC12.47□□□□□ -0.41
Upk1aQ9D132 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.47□□□□□ -0.41
Upk1aQ9D132 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.47□□□□□ -0.41
Upk1aQ9D132 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms