Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gm43125-201ENSMUST00000201724 730 ntBASIC12.18□□□□□ -0.46
Trim13Q9CYB0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim13Q9CYB0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim13Q9CYB0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Gm15770-201ENSMUST00000117498 584 ntBASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Gm15653-201ENSMUST00000119247 907 ntBASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Gm4804-201ENSMUST00000182234 999 ntBASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Gm44335-201ENSMUST00000196879 141 ntBASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Gm44297-201ENSMUST00000198304 141 ntBASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Gm44346-201ENSMUST00000198851 141 ntBASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim13Q9CYB0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms