Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Gm44344-201ENSMUST00000200287 129 ntBASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssu72Q9CY97 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Gm17795-201ENSMUST00000214505 757 ntBASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ssu72Q9CY97 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Gm8000-201ENSMUST00000188378 592 ntBASIC13.05□□□□□ -0.32
Ssu72Q9CY97 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.05□□□□□ -0.32
Ssu72Q9CY97 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ssu72Q9CY97 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms