Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Mir874-201ENSMUST00000104769 76 ntBASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Gm13829-201ENSMUST00000119600 138 ntBASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Gm12485-201ENSMUST00000119641 291 ntBASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Gm15376-201ENSMUST00000122258 783 ntBASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Gm43094-201ENSMUST00000196549 921 ntBASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Gm5161-201ENSMUST00000075243 853 ntBASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.74□□□□□ -0.21
Rnf135Q9CWS1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Gm19220-201ENSMUST00000222682 803 ntBASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf135Q9CWS1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Gm29608-201ENSMUST00000190444 463 ntBASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf135Q9CWS1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf135Q9CWS1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms