Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTRAFQ9CQE8 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTRAFQ9CQE8 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTRAFQ9CQE8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTRAFQ9CQE8 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTRAFQ9CQE8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
RTRAFQ9CQE8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RTRAFQ9CQE8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
RTRAFQ9CQE8 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RTRAFQ9CQE8 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Gm15678-201ENSMUST00000117573 960 ntBASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Mir8098-201ENSMUST00000184011 137 ntBASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
RTRAFQ9CQE8 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms