Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Gm10766-202ENSMUST00000194123 606 ntBASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Gm19931-201ENSMUST00000198920 368 ntBASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Krt88Q9CPR6 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Gm9229-201ENSMUST00000222777 126 ntBASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.87□□□□□ -0.51
Krt88Q9CPR6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.87□□□□□ -0.51
Krt88Q9CPR6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Krt88Q9CPR6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Mir1897-201ENSMUST00000122581 272 ntBASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Krt88Q9CPR6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms