Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Gm19220-201ENSMUST00000222682 803 ntBASIC12.9□□□□□ -0.34
Trim16Q99PP9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim16Q99PP9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim16Q99PP9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim16Q99PP9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim16Q99PP9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim16Q99PP9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim16Q99PP9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.89□□□□□ -0.35
Trim16Q99PP9 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.89□□□□□ -0.35
Trim16Q99PP9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.89□□□□□ -0.35
Trim16Q99PP9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Gm19078-201ENSMUST00000206311 727 ntBASIC12.89□□□□□ -0.35
Trim16Q99PP9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.89□□□□□ -0.35
Trim16Q99PP9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.89□□□□□ -0.35
Trim16Q99PP9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trim16Q99PP9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim16Q99PP9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim16Q99PP9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.88□□□□□ -0.35
Trim16Q99PP9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Gm15376-201ENSMUST00000122258 783 ntBASIC12.88□□□□□ -0.35
Trim16Q99PP9 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.88□□□□□ -0.35
Trim16Q99PP9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim16Q99PP9 Gm37917-201ENSMUST00000194711 392 ntBASIC12.88□□□□□ -0.35
Trim16Q99PP9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.88□□□□□ -0.35
Trim16Q99PP9 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.88□□□□□ -0.35
Trim16Q99PP9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms