Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.13□□□□□ -0.31
Trim33Q99PP7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim33Q99PP7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.12□□□□□ -0.31
Trim33Q99PP7 Gm38144-201ENSMUST00000192790 465 ntBASIC13.12□□□□□ -0.31
Trim33Q99PP7 Gm42550-201ENSMUST00000201553 960 ntBASIC13.12□□□□□ -0.31
Trim33Q99PP7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Gm9908-201ENSMUST00000211534 448 ntBASIC13.12□□□□□ -0.31
Trim33Q99PP7 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.12□□□□□ -0.31
Trim33Q99PP7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.12□□□□□ -0.31
Trim33Q99PP7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim33Q99PP7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Gm27701-201ENSMUST00000184498 110 ntBASIC13.11□□□□□ -0.31
Trim33Q99PP7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim33Q99PP7 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC13.11□□□□□ -0.31
Trim33Q99PP7 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim33Q99PP7 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.11□□□□□ -0.31
Trim33Q99PP7 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.11□□□□□ -0.31
Trim33Q99PP7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim33Q99PP7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.1□□□□□ -0.31
Trim33Q99PP7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Gm15371-201ENSMUST00000117057 784 ntBASIC13.1□□□□□ -0.31
Trim33Q99PP7 Gm15429-201ENSMUST00000151268 798 ntBASIC13.1□□□□□ -0.31
Trim33Q99PP7 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.1□□□□□ -0.31
Trim33Q99PP7 Gm9794-201ENSMUST00000202370 423 ntBASIC13.1□□□□□ -0.31
Trim33Q99PP7 Gm45384-201ENSMUST00000210451 277 ntBASIC13.1□□□□□ -0.31
Trim33Q99PP7 Gm6983-201ENSMUST00000214912 628 ntBASIC13.1□□□□□ -0.31
Trim33Q99PP7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.1□□□□□ -0.31
Trim33Q99PP7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trim33Q99PP7 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms